sequencename
fasta identifier overrides this textbox
originating organism
not listed
Anabaena_PCC7120
Anabaena_variabilis
Arabidopsis_thaliana
Avena_sativa
Caenorhabditis_elegans
Caulobacter_crescentus
Chlamydomonas_reinhardtii
Chlorella_vulgaris
Danio_rerio
Dictyostelium_discoideum
Drosophila_melanogaster
Escherichia_coli
Escherichia_coli_K12
Homo_sapiens
Mus_musculus
Musa_acuminata
Nicotiana_tabacum
Oryza_sativa
Pichia_pastoris
Pisum_sativum
Plasmodium_falciparum
Pneumocystis_carinii
Rattus_norvegicus
Rhodobacter_capsulatus
Saccharomyces_cerevisiae
Schizosaccharomyces_pombe
Spodoptera_frugiperda
Synechocystis_PCC6803
Takifugu_rubripes
Xenopus_laevis
Zea_mays
use textfield below for not listed organisms
select box overrides textfield
sequence
paste in raw or fasta format
color options
Threshold 1: Few used codons
highlight codons used less than
% in
grey
yellow
magenta
green
blue
red
black
Threshold 2: Very few used codons
highlight codons used less than
% in
red
yellow
magenta
green
blue
grey
black
display non highlighted codons in
black
yellow
magenta
green
blue
grey
red
Codon usage table to apply
http_url
Anabaena_PCC7120
Anabaena_variabilis
Arabidopsis_thaliana
Avena_sativa
Caenorhabditis_elegans
Caulobacter_crescentus
Chlamydomonas_reinhardtii
Chlorella_vulgaris
Danio_rerio
Dictyostelium_discoideum
Drosophila_melanogaster
Escherichia_coli
Escherichia_coli_K12
Homo_sapiens
Mus_musculus
Musa_acuminata
Nicotiana_tabacum
Oryza_sativa
Pichia_pastoris
Pisum_sativum
Plasmodium_falciparum
Pneumocystis_carinii
Rattus_norvegicus
Rhodobacter_capsulatus
Saccharomyces_cerevisiae
Schizosaccharomyces_pombe
Spodoptera_frugiperda
Synechocystis_PCC6803
Takifugu_rubripes
Xenopus_laevis
Zea_mays
if organism not listed, select "http_url" and paste
url in textbox below - select box overrides given http_url
http://www.kazusa.or.jp ...
new in version 2.0
read more...
relative adaptiveness
read more...
frequency (like in gcua version 1.0)
outputformat
html
pdf
email-plaintext
if option email is selected please enter address
gcua
version
2.0
October 8th 2006
please cite ...